Soil rot or pox

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Causal organism: Streptomyces ipomoeae (Person & Martin) Waksman & Henrici

 

Synonyms: Actinomyces ipomoeae Person & Martin

 

Other names: pox, pit, ground rot, rootlet rot

 

Taxonomy

 

Class

Actinobacteria

Sub Class

Actinobacteridae

Order

Actinomycetales

Sub order

Streptomycineae

Family

Streptomycetaceae

 

Economic importance

Soil rot caused by Streptomyces ipomoeae is considered a minor disease but under certain circumstances, can produce a marked reduction in yield. In the past this was a serious disease of sweetpotato in the USA. Besides reducing yield,  the disease also affects the quality of the storage root in size appearance and flavour. Affected storage roots are unmarketable in places demanding high quality.

Geographical distribution

The disease has been reported only from Japan and USA.

Symptoms

The pathogen causes lesions on all underground parts of the plant, including fibrous roots, storage roots, and the base of stems.  The disease can be initiated at any stage of crop growth, when appropriate conditions occur (particularly dry weather).

Infection of the fibrous root system is often referred to as "rootlet rot".  Affected plants become stunted, the leaves are smaller and pale and early flowering results.  They often occur as large patches in the field.

Diseased fibrous roots  present dark lesions and break easily as they are dug out.  The thicker roots show deep, dark lesions of different sizes and shapes.

Stems at the base of the plant may develop circular black, sunken or corky lesions.  Generally these are of minor importance compared with the fibrous root damage. In some cases, especially if the disease initiates early in the season the plant can be girdled.

Lesions on storage roots are often referred to as "pox".  When infection occurs late in the season, they may be the only symptom apparent, as late rootlet damage may have no conspicuous impact on crop growth.  The lesions are round to irregular shape, generally less than 3 cm across, and less than 5 mm deep.  They are dark, dry and frequently cracked from the centre or have a rough scaby surface.  They do not spread after harvest, and sometimes the tissue under the lesion becomes partially healed.  In some genotypes, the disease can cause roughening  of the skin rather than discrete lesions.

When storage roots are infected early, the affected portion of the root stops growing  and a misshapen root is formed.  It may be indented at the lesions, or have narrow constricted bands or "dumbell" shape.

Morphology

S. ipomoeae is soilborne, aerobic, strongly oxidative, gram-positive, forming chains of 3-10 oval spores (mycelium), 0.8 -0.9 x 0.9 -1.8µm, with smooth walls . The spirals are about 3-5µm radius that might be incomplete, giving hooks and loops, or 1-2 turns.

In the culture medium, colonies have a bluish green sporulation, but do not have the peculiar earthy smell of other Streptomyces species.

Biology and ecology

The pathogen is soil borne and dissemination occurs by water movement, transit by humans and animals, infected tools, infected planting material, and cow manure.

Once the soil is infested, the bacteria remain inactive until the host is present and conditions are appropriate for infection. Once soil is infested, there is very little chance to eliminate the infection.

Disease is favoured by dry weather and a soil pH above 5.2 and observed to be favoured by warm temperatures.

Host range

Ipomoea batatas (sweetpotato) is the only reported host. However the disease can also infect other members of the Convolvulaceae, including morning glory.

Laboratory inspection and diagnosis

There is an ELISA (enzyme-linked immunosorvent assay) test, for rapid detection of the disease. Special techniques have been developed to isolate the pathogen in the laboratory because isolation from affected tissue has been difficult.

Management

Host-plant resistance

Some  cultivars, like Beauregard and Jasper, showed high levels of resistance while some like Jewel and Centennial, are susceptible.

Cultural control

Crop rotation with 3-4 years between sweetpotato crops.

Avoid dryness of soil with timely irrigation.

Careful selection of planting material.

Avoid introduction from affected to unaffected areas, by restricting movement of equipment, animals, manures or planting material.

If soil is mildly acidic, do not apply lime.  Sulfur can be used to decrease soil pH, but may not be cost-effective.

Chemical control

Soil fumigation with chloropicrin.

References

Bradbury, J.F. 1981. Streptomyces ipomoeae. CMI Descriptions of Pathogenic Fungi and bacteria No. 697 2 p.

Bradbury, J.F. 1986. C.A.B. International Mycological Institute. 332 p.

Schaad, N.W., Jones, J.B., and Chun, W. Laboratory Guide for Identification of Plant Pathogenic Bacteria. Third Edition. APS Press, St. Paul Minnesota 373 p.

 

 

 

Contributed by: Teresa Ames

Taxonomy

Economic importance

Geographical distribution

Symptoms

Morphology

Biology and ecology

Host range

Inspection and diagnosis

Management

References


Rootlet rot caused by  Streptomyces ipomoeae (C. Clark, APS).


Scaby lesions with irregular margins due to infection late in development (W. Martin, APS).

Lesions with cracked surface, and wound periderm forming, giving a partially healed appearance (W. Martin, APS).


Misshapen roots due to early infection (W. Martin, APS).